Here is a list of all functions with links to the classes they belong to:

- c -

• calculate_forward_rate_log_derivative() : gridfire::Reaction, gridfire::reaction::LogicalReaction, gridfire::reaction::Reaction
• calculate_rate() : gridfire::Reaction, gridfire::reaction::LogicalReaction, gridfire::reaction::Reaction
• calculateAllDerivatives() : gridfire::GraphEngine
• calculateAllDerivativesUsingPrecomputation() : gridfire::GraphEngine
• calculateAllReactionFlows() : gridfire::AdaptiveEngineView
• calculateFactors_impl() : gridfire::screening::BareScreeningModel, gridfire::screening::WeakScreeningModel
• calculateMolarReactionFlow() : gridfire::AdaptiveEngineView, gridfire::DefinedEngineView, gridfire::DynamicEngine, gridfire::GraphEngine, gridfire::MultiscalePartitioningEngineView, PyDynamicEngine
• calculateReverseMolarReactionFlow() : gridfire::GraphEngine
• calculateReverseRate() : gridfire::GraphEngine
• calculateReverseRateTwoBody() : gridfire::GraphEngine
• calculateReverseRateTwoBodyDerivative() : gridfire::GraphEngine
• calculateRHSAndEnergy() : gridfire::AdaptiveEngineView, gridfire::DefinedEngineView, gridfire::Engine, gridfire::GraphEngine, gridfire::MultiscalePartitioningEngineView, PyDynamicEngine, PyEngine
• calculateScreeningFactors() : gridfire::screening::BareScreeningModel, gridfire::screening::ScreeningModel, gridfire::screening::WeakScreeningModel, PyScreening
• chapter() : gridfire::Reaction, gridfire::reaction::Reaction
• clear() : gridfire::reaction::TemplatedReactionSet< ReactionT >
• clone() : gridfire::partition::CompositePartitionFunction, gridfire::partition::GroundStatePartitionFunction, gridfire::partition::PartitionFunction, gridfire::partition::RauscherThielemannPartitionFunction, PyPartitionFunction
• collect() : gridfire::DefinedEngineView
• collectAtomicReverseRateAtomicBases() : gridfire::GraphEngine
• collectNetworkSpecies() : gridfire::GraphEngine
• CompositePartitionFunction() : gridfire::partition::CompositePartitionFunction
• compute_and_cache() : gridfire::solver::DirectNetworkSolver::RHSManager
• constructCandidateGroups() : gridfire::MultiscalePartitioningEngineView
• constructPrimingReactionSet() : gridfire::NetworkPrimingEngineView
• constructReactionIndexMap() : gridfire::AdaptiveEngineView, gridfire::DefinedEngineView
• constructSpeciesIndexMap() : gridfire::AdaptiveEngineView, gridfire::DefinedEngineView
• contains() : gridfire::Reaction, gridfire::reaction::Reaction, gridfire::reaction::TemplatedReactionSet< ReactionT >
• contains_product() : gridfire::Reaction, gridfire::reaction::Reaction, gridfire::reaction::TemplatedReactionSet< ReactionT >
• contains_reactant() : gridfire::Reaction, gridfire::reaction::Reaction, gridfire::reaction::TemplatedReactionSet< ReactionT >
• contains_species() : gridfire::reaction::TemplatedReactionSet< ReactionT >
• convert_netIn() : gridfire::approx8::Approx8Network
• cullReactionsByFlow() : gridfire::AdaptiveEngineView