AdaptiveEngineView(DynamicEngine &baseEngine) | gridfire::AdaptiveEngineView | explicit |
calculateAllReactionFlows(const NetIn &netIn, std::vector< double > &out_Y_Full) const | gridfire::AdaptiveEngineView | private |
calculateMolarReactionFlow(const reaction::Reaction &reaction, const std::vector< double > &Y_culled, double T9, double rho) const override | gridfire::AdaptiveEngineView | virtual |
calculateRHSAndEnergy(const std::vector< double > &Y_culled, const double T9, const double rho) const override | gridfire::AdaptiveEngineView | virtual |
Config typedef | gridfire::AdaptiveEngineView | private |
constructReactionIndexMap() const | gridfire::AdaptiveEngineView | private |
constructSpeciesIndexMap() const | gridfire::AdaptiveEngineView | private |
cullReactionsByFlow(const std::vector< ReactionFlow > &allFlows, const std::unordered_set< fourdst::atomic::Species > &reachableSpecies, const std::vector< double > &Y_full, double maxFlow) const | gridfire::AdaptiveEngineView | private |
finalizeActiveSet(const std::vector< const reaction::LogicalReaction * > &finalReactions) | gridfire::AdaptiveEngineView | private |
findReachableSpecies(const NetIn &netIn) const | gridfire::AdaptiveEngineView | private |
generateJacobianMatrix(const std::vector< double > &Y_culled, const double T9, const double rho) override | gridfire::AdaptiveEngineView | virtual |
generateStoichiometryMatrix() override | gridfire::AdaptiveEngineView | virtual |
getBaseEngine() const override | gridfire::AdaptiveEngineView | inlinevirtual |
getJacobianMatrixEntry(const int i_culled, const int j_culled) const override | gridfire::AdaptiveEngineView | virtual |
getNetworkReactions() const override | gridfire::AdaptiveEngineView | virtual |
getNetworkSpecies() const override | gridfire::AdaptiveEngineView | virtual |
getScreeningModel() const override | gridfire::AdaptiveEngineView | virtual |
getSpeciesTimescales(const std::vector< double > &Y_culled, double T9, double rho) const override | gridfire::AdaptiveEngineView | virtual |
getStoichiometryMatrixEntry(const int speciesIndex_culled, const int reactionIndex_culled) const override | gridfire::AdaptiveEngineView | virtual |
LogManager typedef | gridfire::AdaptiveEngineView | private |
m_activeReactions | gridfire::AdaptiveEngineView | private |
m_activeSpecies | gridfire::AdaptiveEngineView | private |
m_baseEngine | gridfire::AdaptiveEngineView | private |
m_config | gridfire::AdaptiveEngineView | private |
m_isStale | gridfire::AdaptiveEngineView | private |
m_logger | gridfire::AdaptiveEngineView | private |
m_reactionIndexMap | gridfire::AdaptiveEngineView | private |
m_speciesIndexMap | gridfire::AdaptiveEngineView | private |
mapCulledToFull(const std::vector< double > &culled) const | gridfire::AdaptiveEngineView | private |
mapCulledToFullReactionIndex(size_t culledReactionIndex) const | gridfire::AdaptiveEngineView | private |
mapCulledToFullSpeciesIndex(size_t culledSpeciesIndex) const | gridfire::AdaptiveEngineView | private |
mapFullToCulled(const std::vector< double > &full) const | gridfire::AdaptiveEngineView | private |
setScreeningModel(screening::ScreeningType model) override | gridfire::AdaptiveEngineView | virtual |
update(const NetIn &netIn) override | gridfire::AdaptiveEngineView | virtual |
validateState() const | gridfire::AdaptiveEngineView | private |
~Engine()=default | gridfire::Engine | virtual |
~EngineView()=default | gridfire::EngineView< DynamicEngine > | virtual |